Bioinformatics

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Junior Research Fellow

Specialization:

Bioinformatics, Machine Learning

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Senior Project Officer

Specialization:

Genomics, NGS, Analytics, Bioinformatics, Data Science

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publications

Genomic, functional, and metabolic enhancements in multidrug-resistant Enterobacter bugandensis facilitating its persistence and succession in the International Space Station

Pratyay Sengupta, Shobhan Karthick Muthamilselvi Sivabalan, Nitin Kumar Singh, Karthik Raman*, Kasthuri Venkateswaran*,

Microbiome

12:62

10.1186/s40168-024-01777-1

Novel spore-forming species exhibiting intrinsic resistance to third- and fourth-generation cephalosporins and description of Tigheibacillus jepli gen. nov., sp. nov.

Georgios Miliotis, Pratyay Sengupta, Asif Hameed, Maria Chuvochina, Francesca McDonagh, Anna Simpson, Ceth Parker, Nitin Singh, Punchappady Rekha, Dearbháile Morris, Karthik Raman, Nikos Kyrpides, & more

mBio

15:e00181-24

10.1128/mbio.00181-24

Phylogenomics, phenotypic, and functional traits of five novel (Earth-derived) bacterial species isolated from the International Space Station and their prevalence in metagenomes

Anna C. Simpson†, Pratyay Sengupta†, Flora Zhang, Asif Hameed, Ceth W. Parker, Nitin K. Singh, Georgios Miliotis, Punchappady D. Rekha, Karthik Raman, Christopher E. Mason*, Kasthuri Venkateswaran*,

Scientific Reports

13:19207

10.1038/s41598-023-44172-w

iCOMIC: a graphical interface-driven bioinformatics pipeline for analyzing cancer omics data

Anjana Anilkumar Sithara, Devi Priyanka Maripuri, Keerthika Moorthy, Sai Sruthi Amirtha Ganesh, Philge Philip, Shayantan Banerjee, Malvika Sudhakar, Karthik Raman*,

Nucleic Acids Research: Genomics and Bioinformatics

3:lqac053

10.1093/nargab/lqac053