Welcome!
Welcome to Raman Lab (Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences, IIT Madras) GitHub Pages. Also check out our home page.
Projects
Fast-SL
Fast-SL enables an efficient enumeration of higher order synthetic lethals in metabolic networks, which may help uncover previously unknown genetic interactions and combinatorial drug targets. Fast-SL is compatible with the COBRA toolbox for MATLAB and LP solvers such as Gurobi.
- GitHub Repo
- Original Research Article in Bioinformatics
- Funding Acknowledgement: Department of Biotechnology, Government of India
ReactionMiner
ReactionMiner is a tool to predict (bio)chemical reactions using graph mining.
- GitHub Repo
- Original Research Article in Bioinformatics
- Funding Acknowledgement: This work was supported by the Indian Institute of Technology Madras grant CSE/14-15/5643/NFSC/SAYN to Sayan Ranu and the Initiative for Biological Systems Engineering (IBSE) at IIT Madras.
Authors and Contributors
- Karthik Raman (@karthikraman)
- Aditya Pratapa (@adityaprat)
- Aarthi R (@aarthi466)
- Karthik Azhagesan (@karthik1290)
- Aravind Sankar (@aravindsankar28)
- Sivaratna Kumari (@sivaratna)
- Srikiran S (@sriki18)
Contact
Karthik Raman (kraman @ iitm·ac·in)